Section control with isobus

We have a 6 row maize drill running on isobus with electric drive.
Would it be possible to use agopen to turn the sections on and off without it upsetting the isobus controller side? Something along the lines of using a nano and a 6 relay board which is linked to each motor. Bit concerned the isobus module might get upset with motors start and stopping that its not controlling . Anyone done this

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